BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006A12LP1|AL425469
(106 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig969 169 1e-42
>3x_Contig969
Length = 3546
Score = 169 bits (84), Expect = 1e-42
Identities = 100/104 (96%), Gaps = 2/104 (1%)
Strand = Plus / Minus
Query: 3 actttgtggaagctgaaytgaaacaaaaaaagttgttgttgaaattctttccaggctcgc 62
||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 1850 actttgtggaagctgaactgaaa-aaaaaaagttgttgttgaaatt-tttccaggctcgc 1793
Query: 63 tacgggaataataggagaagcraggttttaccgagaagtcgcgg 106
||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1792 tacgggaataataggagaagcaaggttttaccgagaagtcgcgg 1749
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 974
Number of Sequences: 1807
Number of extensions: 974
Number of successful extensions: 76
Number of sequences better than 1.0e-20: 1
length of query: 106
length of database: 10,358,551
effective HSP length: 15
effective length of query: 91
effective length of database: 10,331,446
effective search space: 940161586
effective search space used: 940161586
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 48 (96.8 bits)